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The antibiotic resistome: gene flow in environments, animals and human beings

Yongfei Hu, George F. Gao, Baoli Zhu

Frontiers of Medicine 2017, Volume 11, Issue 2,   Pages 161-168 doi: 10.1007/s11684-017-0531-x

Abstract:

The antibiotic resistance is natural in bacteria and predates the human use of antibiotics.Numerous antibiotic resistance genes (ARGs) have been discovered to confer resistance to a wide rangeand agriculture practice leads to a significant increase of antibiotic resistance and a steady accumulationWe propose that the resistance gene flow in nature is “from the natural environments” andgene “circulation.

Keywords： antibiotic resistance     resistome     microbiome     gene flow    

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Assessment of antibiotic resistance genes in dialysis water treatment processes

Xuan Zhu, Chengsong Ye, Yuxin Wang, Lihua Chen, Lin Feng

Frontiers of Environmental Science & Engineering 2019, Volume 13, Issue 3, doi: 10.1007/s11783-019-1136-1

Abstract:

• Quantitative global ARGs profile in dialysis water was investigated.

• Totally 35 ARGs were found in the dialysis treatment train.

• 29 ARGs (highest) were found in carbon filtration effluent.

• erm and mtrD-02 occurred in the final effluent.

• The effluent was associated with health risks even after RO treatment.

Keywords： Dialysis water     Treatment process     Antibiotic resistance gene     High-throughput quantitative PCR     Horizontalgene transfer    

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Distribution and removal of antibiotic resistance genes during anaerobic sludge digestion with alkaline

Mengli Wang, Ruying Li, Qing Zhao

Frontiers of Environmental Science & Engineering 2019, Volume 13, Issue 3, doi: 10.1007/s11783-019-1127-2

Abstract:

The total ARGs concentration showed significant correlation with 16S rRNA gene

Keywords： Tetracycline resistance genes     Sulfonamide resistance genes     16S rRNA gene     Sludge pretreatment     Anaerobic    

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Mitigating microbiological risks of potential pathogens carrying antibiotic resistance genes and virulence

Frontiers of Environmental Science & Engineering 2023, Volume 17, Issue 7, doi: 10.1007/s11783-023-1682-4

Abstract:

● Abundance of MAGs carrying ARG-VF pairs unchanged in rivers after WWTP upgrade.

Keywords： Wastewater treatment plant upgrade     Antibiotic resistance genes (ARGs)     Virulence factors (VFs)     Gene    

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Biofiltration and disinfection codetermine the bacterial antibiotic resistome in drinking water: A review

Kun Wan, Wenfang Lin, Shuai Zhu, Shenghua Zhang, Xin Yu

Frontiers of Environmental Science & Engineering 2020, Volume 14, Issue 1, doi: 10.1007/s11783-019-1189-1

Abstract: The bacterial antibiotic resistome (BAR) is one of the most serious contemporary medical challenges.We extracted the antibiotic resistance gene (ARG) data from recent publications and analyzed ARG profilesprocesses, biofiltration and chlorination were discovered to play important roles in shaping the bacterial antibioticaddition, we analyzed the mechanism behind the impact of biofiltration and chlorination on the bacterial antibiotic

Keywords： Drinking water treatment     Antibiotic resistance gene     Biofiltration     Chlorination    

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Degradation of extracellular genomic, plasmid DNA and specific antibiotic resistance genes by chlorination

Menglu Zhang, Sheng Chen, Xin Yu, Peter Vikesland, Amy Pruden

Frontiers of Environmental Science & Engineering 2019, Volume 13, Issue 3, doi: 10.1007/s11783-019-1124-5

Abstract:

Extracellular DNA structure damaged by chlorination was characterized.

Integrity of extracellular ARG genetic information after chlorination was determined.

Typical chlorine doses will likely effectively diminish extracellular DNA and ARGs.

Plasmid DNA/ARGs were less readily broken down than genomic DNA.

The Bioanalyzer methodology effectively documented damage incurred to DNA.

Keywords： Antibiotic resistance     Antibiotic resistance genes (ARGs)     Extracellular DNA/ARGs     Chlorination    

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Distribution of antibiotic resistance genes and their association with bacteria and viruses in decentralized

Frontiers of Environmental Science & Engineering 2022, Volume 16, Issue 3, doi: 10.1007/s11783-021-1469-4

Abstract:

• Distribution of ARGs in decentralized sewage facilities were investigated.

Keywords： Decentralized sewage treatment facilities     Antibiotic resistance genes     Virus     Metagenomics     Network    

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Environmental Antibiotics and Antibiotic Resistance: From Problems to Solutions

Xin Yu, Virender K. Sharma, Hui Li

Frontiers of Environmental Science & Engineering 2019, Volume 13, Issue 3, doi: 10.1007/s11783-019-1137-0

Abstract:
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Analysis of antibiotic resistance of

Yangyang Yu, Xiaolin Zhu, Guanlan Wu, Chengzhi Wang, Xing Yuan

Frontiers of Environmental Science & Engineering 2019, Volume 13, Issue 3, doi: 10.1007/s11783-019-1123-6

Abstract:

There was a seasonal difference in antibioticresistance of E. coli.listitem>

The E. coli in the Yitong River was found to have multiple antibioticresistance.

Keywords： Yitong River     Coliform bacteria     Antibiotic resistance     Escherichia coli    

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Effect of ultraviolet irradiation and chlorination on ampicillin-resistant

Yuchen PANG,Jingjing HUANG,Jinying XI,Hongying HU,Yun ZHU

Frontiers of Environmental Science & Engineering 2016, Volume 10, Issue 3,   Pages 522-530 doi: 10.1007/s11783-015-0779-9

Abstract: Antibiotic resistance is a serious public health risk that may spread via potable and reclaimed waterof antibiotic resistance genes.Ampicillin is a widely prescribed antibiotic but its effectiveness is increasingly undermined by resistancegene was assessed.Therefore, high UV doses are required for effective disruption of antibiotic resistance genes in bacteria

Keywords： antibiotic resistance     Escherichia coli     ampicillin resistance gene     ultraviolet irradiation     chlorination    

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Transmission of antibiotic resistance genes in agroecosystems: an overview

Jizheng HE, Zhenzhen YAN, Qinglin CHEN

Frontiers of Agricultural Science and Engineering 2020, Volume 7, Issue 3,   Pages 329-332 doi: 10.15302/J-FASE-2020333

Abstract: release of antibiotics into the environment, which imposes high selection pressure on bacteria to develop antibioticresistance.The spread and aggregation of antibiotic resistance genes (ARGs) in multidrug-resistant pathogens isThe future need to control and mitigate the spread of antibiotic resistance in agricultural ecosystems

Keywords： agroecosystem     antibiotic resistance     public health     soil-plant system    

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Presence, dissemination and removal of antibiotic resistant bacteria and antibiotic resistance genes

Qiaowen Tan, Weiying Li, Junpeng Zhang, Wei Zhou, Jiping Chen, Yue Li, Jie Ma

Frontiers of Environmental Science & Engineering 2019, Volume 13, Issue 3, doi: 10.1007/s11783-019-1120-9

Abstract:

Reviewed the change of ARGs and ARB in full-scale urban drinking water systems.

Conventional processes are more promising than BAC process in ARGs removal.

Mechanisms of ARGs enrichment and spread in BAC filter and DWDSs are discussed.

Raise the need of future research on ARGs and ARB change in building plumbing systems.

Keywords： Antibiotic resistant bacteria     Antibiotic resistance genes     Water source     Drinking water treatment plant    

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ARGs-OAP v3.0: Antibiotic-Resistance Gene Database Curation and Analysis Pipeline Optimization Article

Xiaole Yin, Xiawan Zheng, Liguan Li, An-Ni Zhang, Xiao-Tao Jiang, Tong Zhang

Engineering 2023, Volume 27, Issue 8,   Pages 234-241 doi: 10.1016/j.eng.2022.10.011

Abstract:

Antibiotic resistance, which is encoded by antibiotic-resistance genesSARG has been enhanced with sequence curation to improve annotation reliability, incorporate emerging resistance

Keywords： SARG database ARGs-OAP     Antibiotic-resistance genes     Environmental metagenome     Quantification    

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Antibiotic resistome of : molecular determinants for the emergence of drug resistance

Frontiers of Medicine 2021, Volume 15, Issue 5,   Pages 693-703 doi: 10.1007/s11684-020-0777-6

Abstract: Resistome governs essential and separate biological functions to develop resistance against antibioticsThe widespread clinical and nonclinical uses of antibiotics over the years have combined to select antibiotic-resistantAntibiotic resistome is a dynamic and ever-expanding component in Salmonella.The foundation of resistome in Salmonella is laid long before; therefore, the antibiotic resistomethe seminal work in the resistome of S. typhi and the genes involved in the antibiotic resistance

Keywords： S. typhi     antibiotic resistance     mechanism     resistome     identification methods    

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Influences and mechanisms of nanofullerene on the horizontal transfer of plasmid-encoded antibiotic resistance

Qingkun Ji, Caihong Zhang, Dan Li

Frontiers of Environmental Science & Engineering 2020, Volume 14, Issue 6, doi: 10.1007/s11783-020-1287-0

Abstract: . • nC60 can increase cell membrane permeability and alter gene expression. • Results provide evidenceof nC60 promoting antibiotic resistance dissemination.The spread and development of antibiotic resistance globally have led to severe public health problemsIt has been shown that some non-antibiotic substances can also promote the diffusion and spread of antibioticresistance genes (ARGs).

Keywords： Nanofullerene     Sub-minimum inhibitory concentrations     Antibiotic resistance genes     Conjugation     Molecular    

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Title Author Date Type Operation

The antibiotic resistome: gene flow in environments, animals and human beings

Yongfei Hu, George F. Gao, Baoli Zhu

Journal Article

Assessment of antibiotic resistance genes in dialysis water treatment processes

Xuan Zhu, Chengsong Ye, Yuxin Wang, Lihua Chen, Lin Feng

Journal Article

Distribution and removal of antibiotic resistance genes during anaerobic sludge digestion with alkaline

Mengli Wang, Ruying Li, Qing Zhao

Journal Article

Mitigating microbiological risks of potential pathogens carrying antibiotic resistance genes and virulence

Journal Article

Biofiltration and disinfection codetermine the bacterial antibiotic resistome in drinking water: A review

Kun Wan, Wenfang Lin, Shuai Zhu, Shenghua Zhang, Xin Yu

Journal Article

Degradation of extracellular genomic, plasmid DNA and specific antibiotic resistance genes by chlorination

Menglu Zhang, Sheng Chen, Xin Yu, Peter Vikesland, Amy Pruden

Journal Article

Distribution of antibiotic resistance genes and their association with bacteria and viruses in decentralized

Journal Article

Environmental Antibiotics and Antibiotic Resistance: From Problems to Solutions

Xin Yu, Virender K. Sharma, Hui Li

Journal Article

Analysis of antibiotic resistance of

Yangyang Yu, Xiaolin Zhu, Guanlan Wu, Chengzhi Wang, Xing Yuan

Journal Article

Effect of ultraviolet irradiation and chlorination on ampicillin-resistant

Yuchen PANG,Jingjing HUANG,Jinying XI,Hongying HU,Yun ZHU

Journal Article

Transmission of antibiotic resistance genes in agroecosystems: an overview

Jizheng HE, Zhenzhen YAN, Qinglin CHEN

Journal Article

Presence, dissemination and removal of antibiotic resistant bacteria and antibiotic resistance genes

Qiaowen Tan, Weiying Li, Junpeng Zhang, Wei Zhou, Jiping Chen, Yue Li, Jie Ma

Journal Article

ARGs-OAP v3.0: Antibiotic-Resistance Gene Database Curation and Analysis Pipeline Optimization

Xiaole Yin, Xiawan Zheng, Liguan Li, An-Ni Zhang, Xiao-Tao Jiang, Tong Zhang

Journal Article

Antibiotic resistome of : molecular determinants for the emergence of drug resistance

Journal Article

Influences and mechanisms of nanofullerene on the horizontal transfer of plasmid-encoded antibiotic resistance

Qingkun Ji, Caihong Zhang, Dan Li

Journal Article